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Invitrogen iBlot 2 - User Manual

Invitrogen iBlot 2
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For Research Use Only. Not for use in diagnostic procedures.
iBlot
2 Dry Blotting System
USER GUIDE
For dry, electroblotting of proteins from mini-, midi-, and E-
PAGE
gels
Catalog Number IB21001
Publication Number MAN0009112
Revision E.0

Table of Contents

Questions and Answers

  • B
    Brandon BarnesAug 19, 2025
    What to do if I see empty spots on the Invitrogen Laboratory Equipment membrane?
    • J
      jacksonwilliamAug 19, 2025
      If you observe empty spots on the membrane, it may be due to air bubbles trapped between the gel and the membrane, preventing protein transfer. Ensure you remove all air bubbles using the Blotting Roller. Another cause could be the use of expired or creased membranes. Always use the iBlot™ 2 Transfer Stacks before the expiration date printed on the package.
  • J
    Justin DavisAug 21, 2025
    Why is my Invitrogen iBlot 2 Laboratory Equipment not transferring proteins to the membrane?
    • J
      Joseph MorenoAug 21, 2025
      If proteins are not transferring to the membrane, check that the electrical circuit is complete and current is flowing through the device. Also, verify that you are using the correct method. Refer to the manual to ensure the electrical circuit is complete and current is flowing through the device. Be sure to use the correct Method.
  • A
    Amy RoyAug 26, 2025
    What causes high background in Invitrogen iBlot 2 results?
    • M
      Monica ArellanoAug 26, 2025
      High background can occur if TBST buffers are used for washing. Use PBST or WesternBreeze™ wash solutions instead.
  • G
    Gene JohnsonAug 28, 2025
    Why is it difficult to close the lid of my Invitrogen iBlot 2?
    • D
      Daniel CardenasAug 28, 2025
      Difficulty closing the lid can occur if the transfer stack is too thick. The iBlot™ 2 Gel Transfer Device can only support gels of ?1.5mm thickness. Ensure the proper gel is being used. Also, make sure that additional filter pads have not been added and that the stack tray is properly aligned. Only use the supplied filter paper with the iBlot™ 2 Transfer Stacks. Do not remove the transfer stack from the plastic sample tray.
  • D
    Dave SmithAug 30, 2025
    What to do if Invitrogen iBlot 2 Laboratory Equipment signal intensity is similar for different protein loads?
    • W
      Walter Hill DDSAug 30, 2025
      If the signal intensity is similar for different protein loads, it could be due to a high protein load where detection is not within the linear range. It is recommended to decrease the protein load, use more diluted antibody, or perform detection for a shorter time. Optimization may be needed.
  • P
    Peter RamirezSep 1, 2025
    What causes protein blow-through in Invitrogen Laboratory Equipment?
    • J
      James JonesSep 1, 2025
      Protein blow-through can happen if the transfer time was too long. Reduce the transfer time by 30-second increments. Note that pre-stained markers are charged and tend to blow-through more than regular proteins.
  • A
    Amy SuttonSep 3, 2025
    Why are high molecular weight proteins remaining in the gel after transfer with Invitrogen iBlot 2 Laboratory Equipment?
    • C
      cookdarrylSep 3, 2025
      If high molecular weight proteins remain in the gel after transfer, it could be due to an incorrect method or transfer conditions. Use the appropriate method and run time based on the gel type. For mini or midi gels: Perform ethanol equilibration step to improve transfer. Use a Tris-acetate gel to separate the high molecular weight proteins. Increase the transfer time in 30 second increments. For E-PAGE™ gels: Increase the transfer time in 30 second increments. Use Method P3 for 8 minutes.
  • N
    Natasha WallaceSep 5, 2025
    Why are protein bands distorted on the membrane when using Invitrogen iBlot 2?
    • C
      Christian FloresSep 6, 2025
      Distorted protein bands on the membrane can be caused by a non-uniform electric field around the wells. Ensure the gel is properly flattened using the Blotting Roller. Follow the recommendations to obtain good results.
  • K
    Kathryn HallSep 8, 2025
    What causes corrosion of the Top Stack in Invitrogen Laboratory Equipment?
    • J
      jonesdanSep 8, 2025
      Corrosion of the Top Stack can be caused by incorrect placement. Be sure the Top Stack is placed correctly with the copper electrode facing up. Avoid placing the Top Stack in the inverted position.
  • J
    jeffreylawsonSep 10, 2025
    What should I do if protein is not binding/transferring to membrane (PVDF) in Invitrogen iBlot 2?
    • M
      mitchell26Sep 10, 2025
      If protein is not binding/transferring to a PVDF membrane, it may be because the membrane was dry or partially dry. Regions where PVDF membranes are dry appear whiter than places where the membrane is wet. Remove the membrane, reactivate it in 100% methanol, and rinse in water before reapplying to the transfer stack.

Summary

CHAPTER 1 Product Information

Product Contents

Details about the components included with the iBlot™ 2 Gel Transfer Device.

Before Starting

Safety information and precautions to take before using the product.

Installing the Instrument

Instructions and conditions for setting up the iBlot™ 2 Gel Transfer Device.

Unpacking Instructions

Procedures for safely unpacking the instrument upon receipt.

iBlot 2 Gel Transfer Device Overview

Overview of the front view of the iBlot™ 2 Gel Transfer Device.

About the iBlot 2 Dry Blotting System

General explanation of the system, its features, components, and operation.

Description of Parts

Detailed descriptions of the individual components of the device.

Device Operation and Settings

Covers setting date/time, tutorials, logs, firmware, factory reset, methods, and parameters.

Product Specifications

Technical specifications for the iBlot™ 2 Gel Transfer Device and stacks.

Accessory Products

Information on compatible accessories and related products.

CHAPTER 2 Protein Transfer Protocol

Experimental Overview

Outline of the steps for performing western blotting and general recommendations.

Recommended Gel Types

Lists compatible gel types for use with the iBlot™ 2 system.

Using the iBlot 2 Gel Transfer Device

Step-by-step instructions for assembling the device and performing blotting.

Selecting a Method

How to choose an appropriate blotting method on the device interface.

Removing the Gel

Procedure for carefully removing the gel from the cassette.

Assembling the iBlot 2 Transfer Stack

Detailed steps for correctly assembling the transfer stack components.

Performing Blotting

Instructions on how to conduct the actual protein transfer process.

Disassembling the iBlot 2 Transfer Stack

Steps for taking apart the transfer stack after the blotting procedure.

CHAPTER 3 Custom Methods

Creating Custom Methods

Steps to create and program new blotting methods from scratch.

Save a Custom Method

Procedure for naming and saving newly created custom methods.

Creating Custom Methods from a Template

Guide on using pre-set templates or saved methods as a starting point.

Change Voltage;Time

How to modify voltage and time settings for individual steps in a method.

Add;Remove Steps

Instructions for adding or deleting steps within a custom method.

APPENDIX A Troubleshooting

Introduction

Overview of common issues and how to resolve them.

No Current Issues

Troubleshooting steps when the device does not detect current.

Protein Transfer Issues

Solutions for problems like no protein transfer or empty spots on the membrane.

Band Distortion and Blow-through

Addressing issues with distorted protein bands or protein blow-through.

Membrane Binding and Background Issues

Troubleshooting problems with protein binding, high background, and membrane discoloration.

APPENDIX B Post Transfer Analysis

Post Transfer Analysis

Procedures after blotting, including immunodetection, storage, and staining.

APPENDIX C Optimizing Blotting

Optimizing Blotting

Strategies for improving protein transfer efficiency through parameter adjustments.

APPENDIX D Maintenance

Cleaning and General Maintenance

Instructions for cleaning and routine upkeep of the instrument.

Replacing the Fuse

Procedure for replacing the device's fuse.

Replacing Electrical Contacts

Step-by-step guide for replacing worn electrical contacts.

APPENDIX E Product Specifications

iBlot 2 Gel Transfer Device Specifications

Detailed technical specifications for the main device.

iBlot 2 Transfer Stack Specifications

Detailed technical specifications for the transfer stacks.

APPENDIX F Accessory Products

iBlot 2 Transfer Stacks

Ordering information for iBlot™ 2 Transfer Stacks.

Additional Products and Precast Gels

Lists other available reagents, precast gels, and premade buffers.

APPENDIX G Safety

Instrument Safety

General warnings and precautions for instrument operation, including physical and electrical hazards.

Electrical Safety

Safety precautions related to electrical hazards and power supply.

Cleaning and Decontamination Safety

Safe procedures for cleaning and decontaminating the instrument.

Chemical and Biological Hazard Safety

Guidelines for safely handling chemicals and biological materials.

Safety and EMC Standards

Explains instrument symbols and lists relevant safety and EMC standards.

APPENDIX H Documentation and Support

Customer and Technical Support

Information on how to contact support for the product.

Limited Product Warranty

Details regarding the product's warranty policy.

Invitrogen iBlot 2 Specifications

General IconGeneral
Voltage Range20-25 V
TechnologyDry blotting technology
ApplicationProtein Transfer
Power Supply100-240 V AC
Transfer Time7 minutes
Compatible MembranesPVDF, Nitrocellulose
Gel SizeMini and midi gels

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