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LI-COR ODYSSEY Series User Manual

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Operator’s Manual

Table of Contents

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LI-COR ODYSSEY Series Specifications

General IconGeneral
BrandLI-COR
ModelODYSSEY Series
CategoryAll in One Printer
LanguageEnglish

Summary

CE Marking

Safety and Warnings

Safety Notes

General safety advice and precautions for operating the instrument.

Equipment and Manual Markings

Explanation of symbols on the instrument and in the manual.

Notices and Compliance

General Notice and Printing History

Disclaimer about information changes and manual revision records.

FCC Interference Statement

Statement regarding radio frequency interference compliance.

Chapter 1: Safety and Operational Information

Manual Overview

Overview of topics discussed in the manual.

Safety Considerations

Detailed safety guidelines and precautions for using the instrument.

Laser Safety

Information on laser classification and safety precautions to avoid exposure.

Safety Interlocks

Explains the function of safety interlocks that disable lasers when the cover is open.

Chemical Safety

Guidelines for handling biochemicals and avoiding hazards with chemicals.

Instrument Placement and Environment

Guidance on instrument location, temperature, dew point, ventilation, and space.

Moving and Leveling the Imager

Recommendations for moving the instrument and ensuring it is level.

Electrical and Maintenance Guidelines

Electrical Considerations and Power Cords

Information on power requirements, grounding, and cord safety.

Fuse Replacement, Routine Maintenance, and Cable Inspection

Notes on fuses, general maintenance, and cable inspection.

Chapter 2: Overview and General Description

Buttons and Indicator Lights

Identification and description of front panel controls and indicators.

Power and Eject Button Functions

Details on primary and secondary functions of the power and eject buttons.

Indicator Lights and Back Panel Connectors

Status lights explanation and back panel connector details.

Hardware Description

Explanation of scanning, detection hardware, and signal processing.

Odyssey Sa Server and Software

Role of the server in data handling and software communication.

Chapter 3: Operation

Selecting and Compatibility of Microplates

Criteria for choosing microplates and compatibility standards.

Focus Offset and Scanning Procedures

Setting focus offset and steps for scanning microplates.

Starting Microplate Scans

How to initiate a scan using the Image Studio software.

Scanning Membranes

Instructions for scanning membranes using the dedicated carrier.

Scanning Gels

Instructions for scanning stained gels using the membrane carrier.

Using the Bar Code Reader

How to use the optional bar code reader for sample identification.

Bar Code Reader Compatibility

Details supported bar code symbologies and character limits.

Chapter 4: Assembling the Odyssey Sa System

System Assembly and Network Connection

Connecting the instrument to a network and computer.

Software Key Import and User Management

Adding software keys and managing user accounts.

Network Connection Confirmation

Verifying communication between Image Studio and the Odyssey Sa Imager.

Scanner Login and User Accounts

How to connect to the instrument and manage user accounts.

Adding Users

Procedure for creating new user accounts on the Odyssey Sa Imager.

Configuring Automatic IP Addressing

Setting up the instrument for automatic network configuration.

Network Configuration Settings

Dialog for setting IP configuration to Automatic or Manual.

Resetting Network Configuration

Steps to reset network settings if connection fails.

Automatic IP Address Configuration

Detailed steps to reconfigure the network to automatic addressing.

Chapter 5: Installing a BioTek® BioStack™™ Plate Stacker

Installation Overview and Components

Introduction to the BioStack system and its parts.

Initial Setup and Cable Connections

Pre-installation steps and connecting communication cables.

Initial Odyssey Sa and BioStack Setup

Pre-installation checks for both the Imager and BioStack.

BioStack Stand Orientation and Placement

How to orient the BioStack and place it on its stand.

Securing BioStack and Connecting Cables

Securing the BioStack to the stand and connecting USB cables.

BioStack Power Initialization

Connecting power to the BioStack and its initialization process.

Leveling the Odyssey Sa Imager

Ensuring the main instrument is level.

Odyssey Sa Imager Leveling Adjustment

Detailed instructions for adjusting the leveling feet.

Installing the Locator Clamp

Attaching the clamp to the Imager.

Securing the Locator Clamp

Steps to open, position, and lock the locator clamp.

Leveling the BioStack Plate Stacker

Ensuring the BioStack is level.

BioStack Height Adjustment

Adjusting the height of the BioStack plate gripper.

Retracting Plate Carrier

Retracting the Odyssey Sa Imager plate carrier after adjustments.

BioStack Gripper Leveling

Final leveling of the BioStack gripper.

Connecting BioStack to Locator Clamp

Attaching the BioStack stand to the locator clamp.

Aligning and Securing BioStack Pins

Adjusting and tightening pins for connection.

Verifying Clearance and Alignment

Checking clearance and re-verifying alignment.

BioStack X-Y Alignment

Aligning the BioStack in horizontal dimensions.

X-Y Alignment Adjustment

Fine-tuning the BioStack's position for precise placement.

Tightening Alignment Knobs

Securing the alignment pins after adjustments.

Removing Fixture and Initializing BioStack

Removing the alignment fixture and turning on the BioStack.

BioStack Z-Axis Training

Calibrating the vertical (Z-axis) movement of the BioStack gripper.

Initiating Z-Axis Training

Starting the Z-axis training process within the Image Studio software.

Measuring Z-Axis Distance

Using a ruler to measure the distance for calibration.

Setting Move Amount for Z-axis

Entering the measured distance plus offset for gripper movement.

Correcting Z-Axis Gripper Position

Adjusting the gripper's stop position.

Express Run Errors

Common errors encountered during automated runs.

Troubleshooting BioStack Issues

Methods to resolve jams, placement, and communication problems.

Chapter 6: Appendix

Laser/Microscope and Operating Specifications

Technical details on components and environmental conditions.

Power Requirements and Network

Electrical specifications and network connection details.

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