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diagenode Bioruptor - User Manual

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USER MANUAL
Version 1.1
Bioruptor
®
Plus
Cat. No. UCD-300
Bioruptor
®
Sonication System

Questions and Answers

  • M
    mallory10Jul 28, 2025
    Why are washes after fixation important for diagenode Bioruptor?
    • D
      David WatsonJul 28, 2025
      Washing the fixed cells properly is important. Make sure to eliminate all the formaldehyde. Glycine can be used to stop the fixation.
  • D
    Darryl SerranoAug 3, 2025
    How long should the fixation step be for diagenode Bioruptor Medical Equipment?
    • T
      Thomas AdamsAug 3, 2025
      The fixation should be done for 10 minutes, but a time course can be used when needed.
  • B
    Barbara FoxAug 12, 2025
    What temperature should I use for fixation with diagenode Bioruptor Medical Equipment?
    • S
      starkstephenAug 12, 2025
      Fixation should be done at room temperature.
  • S
    Sergio RiveraAug 19, 2025
    What is the formaldehyde final concentration for diagenode Bioruptor Medical Equipment?
    • K
      kristina33Aug 19, 2025
      The formaldehyde final concentration is 1%.

Summary

Critical Steps for Maintenance and Efficient Shearing

Bioruptor Plus Technical Specifications

Temperature Control Methods

Equipment Installation Guide

Installation Overview and Conditions

General overview and safety conditions for installing the equipment.

Power Supply Adapter and Cable Connections

Installing the Bioruptor Plus

Controlling the Sonication Process

Setting Sonication Parameters

How to program cycle number, ON/OFF times, and intensity.

Overheat Shutdown and Warnings

Tube Holders and Tube Compatibility

Standard Protocols for Shearing

DNA Shearing Protocol

Recommended protocol and operating conditions for DNA shearing.

Operating Conditions for DNA Shearing

Specifies sample volume, tubes, buffer, and concentration for DNA shearing.

DNA Shearing Parameters and Cycles

Important Comments for DNA Shearing

Tube and Sample Volume Recommendations

Guidance on choosing tubes and optimal sample volumes.

DNA Concentration and Preparation Tips

Advice on DNA concentration, sample preparation, and viscosity.

DNA Quality and Purity Requirements

Importance of DNA quality, purity, and extraction methods.

Water Temperature and Cooling Strategies

How water temperature affects sonication and cooling methods.

Sonication Time and Bath Maintenance

Guidance on sonication timing and sonication bath upkeep.

Chromatin Shearing

Critical Points for Chromatin Shearing

Key factors affecting chromatin shearing efficiency and protocol.

Chromatin Shearing Procedures

Bacterial Cell Disruption Protocol

Bacterial Cell Disruption Results and DNA Release

Troubleshooting Chromatin Shearing FAQs

diagenode Bioruptor Specifications

General IconGeneral
ModelBioruptor
ApplicationDNA, Chromatin, and Protein Shearing
TechnologyUltrasonication
Number of Samples12 tubes per run
CoolingRequires water cooling system (e.g., Diagenode Cooling System)
Programmable CyclesYes
TimerYes, programmable timer
Voltage100-240 VAC
TypeUltrasonic cell disrupter

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