26 Agilent 6400 Series Triple Quad LC/MS Concepts Guide
2 Inner Workings – Triple Quadrupole MS versus Single Quadrupole MS 
Innovative Enhancements in the 6460 Triple Quadrupole 
The desolvated ions then enter the mass spectrometer via an 
innovative resistive and highly inert capillary transfer tube 
(denoted as 2 on the 6460 in Figure 7 on page 22) that improves 
ion transmission and allows virtually instantaneous polarity 
switching. 
Further improving the sensitivity is improved pumping in 
vacuum stage 2 that allows more pumping speed behind the 
skimmer and improved ion capturing by first octopole (denoted 
as 3 on the 6460 in Figure 7). The ions next pass through optics 
and into the first quadrupole analyzer. The quadrupole analyzer 
consists of four parallel hyperbolic rods through which selected 
ions based on their mass to charge ratio are filtered.
The ions passing through the first quadrupole analyzer are then 
directed through an improved collision cell where they are 
fragmented. The collision cell is typically called the second 
quadrupole, but in this case, geometrically it is actually a 
hexapole filled with nitrogen, the same gas that is used as the 
drying gas. Agilent innovation has led to the design of a 
collision cell that has axial acceleration for high speed MS/MS 
analysis (denoted as 4 on the 6460 in Figure 7). Fragment ions 
formed in the collision cell are then sent to the third 
quadrupole for a second filtering stage to enable a user to 
isolate and examine product ions with respect to precursor 
ions.
Finally, the ions that pass through the third quadrupole are 
detected using a high energy detector. A second turbo pump has 
been added (denoted as 5 on the 6460 in Figure 7) to increase 
pumping speed and improve the vacuum which will further 
improve the signal to noise and enhance the limit of detection of 
the triple quadrupole.