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illumina MiniSeq User Manual

illumina MiniSeq
63 pages
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MiniSeq
System Guide
Document # 1000000002695 v02 Material # 20014309
March 2018
ILLUMINA PROPRIETARY
For Research Use Only. Not for use in diagnostic procedures.
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illumina MiniSeq Specifications

General IconGeneral
Instrument TypeBenchtop Sequencer
Sequencing TechnologySequencing by Synthesis (SBS)
Read LengthUp to 2 x 150 bp
OutputUp to 7.5 Gb
Run Time4 - 24 hours
Data Quality≥ 80% bases ≥ Q30
Maximum Reads25 million
Sample Capacity1
ApplicationsTargeted Gene Sequencing, Small Genome Sequencing, Amplicon Sequencing, Gene Expression Profiling
Power Requirements100-240 V, 50-60 Hz
Operating Temperature19°C to 25°C
Operating HumidityNon-condensing, 20% to 80% RH

Summary

Chapter 1: Overview (Continued)

Instrument Components Overview

Describes the main physical and software components of the MiniSeq instrument.

Sequencing Consumables Overview

Introduces the various consumables required for sequencing runs.

Reagent Cartridge Overview

Explains the reagent cartridge, its contents, and usage.

Chapter 2: Getting Started

Starting the MiniSeq Instrument

Provides step-by-step instructions for powering on and starting the instrument.

Customizing System Settings

Guides users through configuring various system preferences and options.

Chapter 2: Getting Started (Continued)

Configuring Analysis Settings

Explains options for data transfer and downstream analysis configurations.

Chapter 3: Sequencing (Continued)

Sequencing Workflow: Standalone Configuration

Details the steps for setting up and running a sequencing workflow in standalone mode.

Sequencing Workflow: BaseSpace/LRM Configuration

Outlines the workflow for runs configured with BaseSpace or Local Run Manager.

Preparing Sequencing Consumables

Guides on preparing reagents and flow cells for a sequencing run.

Loading Libraries onto Reagent Cartridge

Instructions for loading prepared libraries into the reagent cartridge.

Loading the Flow Cell

Step-by-step guide for properly loading the flow cell into the instrument.

Entering Run Parameters

Guides users on specifying run name, library ID, and read parameters.

Setting Up a Sequencing Run

Covers the process of defining run parameters and initiating a sequencing run.

Loading the Reagent Cartridge

Instructions for loading the reagent cartridge into the instrument.

Chapter 4: Maintenance

Performing a Manual Instrument Wash

Details procedures for performing quick and manual post-run washes.

Chapter 4: Maintenance (Continued)

Automatic Software Update Procedure

Details the process for automatically updating the instrument software.

Manual Software Update Procedure

Provides instructions for manually updating the instrument software.

Appendix A: Troubleshooting

Appendix A: Troubleshooting (Continued)

Resolving Automatic Check Errors

Provides steps to resolve errors detected during the pre-run check.

Troubleshooting Instrument Components

Addresses issues related to instrument hardware components and performance.

Performing a System Check

Guides users on initiating and executing a system check on the instrument.

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