illumina NextSeq 550Dx User Manual

R
RAID error message 49
read length 15-16
reagent cartridge
overview 7
reservoir #28 36
reagent compartment 3
reagents
kitted 6
proper disposal 21
Real-Time Analysis software 1, 4
phasing 55
results 59
workflow 54
reboot
instrument 40-41
reboot to research mode 12
rehybridization, Read 1 46
restart 41
RFID tracking 6
RTA2
error handling 54
run copy service 25
run duration 15-16
run metrics 24
run parameters
BaseSpace mode 22
edit parameters 22
standalone mode 23
run setup, advanced option 13
RunInfo.xml 43, 59
RUO mode 12
S
scan output files
GTC, IDAT 62
sequencing
introduction 15
user-supplied consumables 13
sequencing workflow 54
shutting down the instrument 41
sodium hypochlorite, wash 36
software
automatic update 40
configuration settings 50
image analysis, base calling 4
initialization 11
manual update 40
on-instrument 4
run duration 15-16
spent reagents
container full 46
disposal 19, 37
standalone configuration 23
status alerts 4
status bar 3
swath numbering 60
system settings 12
system user name and password 11
T
technical assistance 69
template generation 54
tile numbering 61
troubleshooting
cannot read BeadChip barcode 48
contact options 43
low quality metrics 46
pre-run check 44
replace manifest and cluster files 49
run-specific files 43
scan-specific files 44
scan registration failure 48
spent reagents container 46
U
updating software 39
user-supplied consumables 13-14
user name and password 11
W
wash
automatic 26
manual wash 35
user-supplied consumables 35
wash components 35
Windows
exit 41
workflow
advanced loading option 13
BaseSpace login 18
BaseSpace mode 22
BeadChip 30
buffer cartridge 21
flow cell 18
Document # 1000000041922 v01
For Research Use Only. Not for use in diagnostic procedures.
67
NextSeq 550Dx Research Mode Instrument Reference Guide

illumina NextSeq 550Dx Specifications

General

Brand	illumina
Model	NextSeq 550Dx
Category	Laboratory Equipment
Language	English