EasyManua.ls Logo

Eppendorf Mastercycler Gradient - User Manual

Default Icon
65 pages
Print Icon
To Next Page IconTo Next Page
To Next Page IconTo Next Page
Loading...
Scientific
Mastercycler
®
/ Mastercycler
®
gradient
Operating Manual
Question and Answer IconNeed help?

Do you have a question about the Eppendorf Mastercycler Gradient and is the answer not in the manual?

Summary

Introduction to Mastercycler

Safety Precautions for Mastercycler Operation

Voltage and Electrical Safety

Ensure correct power supply and grounded socket usage for device safety.

Material and Environment Hazards

Avoid explosive materials, liquids, and ensure proper ventilation for safe operation.

Burn Hazards and Material Stability

Caution about hot surfaces and use of temperature-stable materials.

Thermoblock and Lid Symbols

Understanding warning symbols for thermoblock and gradient mode.

Mastercycler Installation Guide

Delivery Package Contents

List of items included in the Mastercycler ® delivery package.

Device Setup and Space Requirements

Guidelines for placing the device and ensuring adequate ventilation.

Initial Device Startup Procedure

Steps to connect power and prepare the device for its first use.

Technical Description of Mastercycler

Device Construction Overview

Description of the physical components and views of the Mastercycler ®.

Control Panel Key Functions

Explanation of the programming and cursor keys on the control panel.

Programming Keys: Opt, Del, Sel, Ins

Detailed functions of specific programming keys for operation and editing.

Cursor and Control Keys

Usage of cursor keys for navigation and control keys for menu/program interaction.

Display Information Fields

Understanding the menu and programming fields of the device display.

Mastercycler Menu Descriptions

Main Menu Structure and Navigation

Overview of the main menu and methods for navigating through its options.

Starting Programs

Procedures for initiating program execution, either directly or from a list.

Files Menu Functions

Accessing and managing program files (Edit, Load, Standard, New, Delete).

Editing Existing Programs

How to modify programs already stored in the device or on a card.

Loading Programs from Memory;Card

Retrieving programs from internal memory or personal cards for editing.

Using the Standard Example Program

Utilizing a pre-defined program as a template for new programs.

Creating New Programs

Steps to initiate and define a completely new PCR program sequence.

Deleting Programs from Memory

Removing unwanted programs from the device's internal memory.

Options Menu: System Settings

Configuring general system parameters like time, date, and printer settings.

Editor Options and Display Settings

Customizing the program editor view, including displaying extended temperature options.

Printer Settings and Modes

Configuring printout editor and print protocol settings for printer output.

Gradient Functionality

Utilizing the gradient feature for temperature distribution across the thermoblock.

General Settings: Clock, Remote, Sound

Configuring device time, PC connection rates, and audible feedback.

General Settings: Etc and Auto Restart

Setting device startup behavior and automatic program restart after power loss.

Validation and Calibration Programs

Using specific programs for device testing, validation, and temperature calibration.

Heated Lid Control

Adjusting heated lid temperature and on/off status for condensation prevention.

Incubate Function for Block Preheating

Setting block temperature for incubation or preheating, aligning lid temperature.

Mastercycler Operation Procedures

Sample Preparation and Loading

Guidelines for preparing the thermoblock and loading various tube types or plates.

Sample Volume and Tube Control

Setting sample volume and adapting temperature control to tube type.

Heated Lid Operation and Safety

Details on heated lid function, condensation prevention, and burn risks.

Block Temperature Control

Procedures for preheating the thermoblock for incubation or faster start times.

Device Power On Procedure

Steps to switch on the device and view the initial display.

Starting Programs from the Processing Level

Initiating program execution, either directly or from a list.

Starting Programs with CNTRL;TUBE Command

Entering tube type and fill volume for programs using the CNTRL/TUBE command.

Displaying Program Running Time

Viewing approximate run time and expected end time of an active program.

Interrupting and Pausing Programs

Procedures for pausing or interrupting an ongoing PCR program.

Resuming Interrupted Programs

Steps to continue a program that was previously paused or interrupted.

Aborting a Program

How to completely cancel an active PCR program.

Device Power Off Procedure

Steps for safely switching off the Mastercycler ® device.

Mastercycler Programming Guide

Program Command Overview

Introduction to program structure, line limits, and command entry methods.

CNTRL Command for Temperature Control

Defining block temperature regulation mode (Block or Tube).

Lid Temperature Control Commands

Setting heated lid temperature and its behavior at program start/end.

Temperature (T) Command Details

Entering target temperatures, increments, and cycle times for program steps.

Temperature Increment and Time Increment

Adjusting temperature and time per cycle for program steps.

Ramp and Ramp Increment Settings

Defining heating/cooling rates and their incremental changes per cycle.

Gradient Programming (G)

Setting temperature gradients across the block for Mastercycler ® gradient models.

HOLD Command for Temperature Maintenance

Pausing program execution while maintaining a specific temperature.

PAUSE Command for Interruption

Temporarily interrupting a program, allowing for user-defined text entry.

GOTO and REP Commands for Cycles

Repeating program sections or entire programs for multiple cycles.

SOUND Command for Alerts

Activating acoustic signals for program events like pauses or completion.

LINK Command for Program Chaining

Connecting multiple programs to run sequentially.

END Command

Finalizing a program and switching off temperature control.

Creating New Programs: Overview

General process for creating new PCR programs, including gradient options.

Step-by-Step Program Creation

Detailed instructions for entering commands like CNTRL, LID, T, and time.

Saving a New Program

Procedures for saving a newly created or modified program with a specific name.

Modifying Existing Programs

Loading and editing programs already stored in memory or on a personal card.

Modifying and Checking Programs

Detailed steps for changing program lines, inserting, deleting, and saving modifications.

Creating Programs Using Example

Utilizing the "Standard" example program as a base for new program creation.

Deleting Programs

Steps to remove programs from the device's memory.

Programming Examples Overview

Introduction to various programming examples demonstrating device versatility.

Gradient PCR Example

Specific programming steps for performing Gradient PCR on compatible models.

Hot Start PCR Example

Example program demonstrating Hot Start PCR technique with pause for reagent addition.

Touch Down PCR Example

Example program illustrating Touch Down PCR with temperature increments per cycle.

Long PCR Example

Example program for Long PCR, focusing on extending elongation time per cycle.

RAPD-PCR Fingerprinting Example

Example program for RAPD-PCR, detailing heating rates and gradual temperature changes.

Sample Cooling and Subsequent PCR

Advanced programming technique for keeping samples cool before a linked PCR protocol.

Mastercycler Short Instructions

Switching on the Device

Quick steps for powering up the Mastercycler ® and accessing the main menu.

Modifying the Standard Example Program

Instructions for editing the pre-defined "Standard" program for custom use.

Program Saving and Line Management

Brief steps for saving programs and managing lines (adding/deleting).

System Settings and Program Execution

Summarized access to system settings and program execution controls (start, stop, interrupt).

Mastercycler Personal Card Usage

Personal Card Safety and Handling

Guidelines for safe handling, insertion, removal, and formatting of the personal card.

Processing Programs via Personal Card

Steps for managing programs (start, load, save, delete) using the personal card.

Mastercycler Interface Description

Printer and PC Connectivity

Connecting the device to printers and PCs via specified ports and cables.

Program Printout and Protocol Examples

Illustrative examples of the data format generated during program printout and protocol.

PC Connection and Program Transfer

Configuring PC communication settings and transferring programs between devices.

Mastercycler Maintenance Guidelines

Mastercycler Troubleshooting Guide

Error Message Identification and Cause

Listing common error messages, their causes, and initial solutions.

Test Program Execution Guide

Step-by-step instructions for running the built-in test program for device monitoring.

Mastercycler Technical Data

Mastercycler Ordering Information

Consumables and Auxiliary Equipment

Catalog of disposable items and recommended accessory devices for the Mastercycler ®.

PCR Reagents Catalog

Listing of available PCR reagents, including enzymes and nucleotide mixes.

Mastercycler Index

Support and Services Directory

United States Contact Information

Contact details for Eppendorf North America, Inc. for support, repair, and lab inquiries.

Canada Contact Information

Contact details for Brinkmann Instruments (Canada) Ltd. for support, repair, and lab inquiries.

Eppendorf Mastercycler Gradient Specifications

General IconGeneral
Block format96-well
Capacity96 x 0.2 ml tubes
Temperature uniformity±0.3°C
DisplayLCD
InterfaceRS-232
Power requirements50/60 Hz

Related product manuals