Brief Introduction to Chlorophyll Fluorescence 
 
CIRAS-2 Operator's Manual Version 2.04 
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very  small  (<0.05  µmol  m
-2 
s
-1
),  too  small  to  induce  significant  physiological  change  in  the  sample 
(Schreiber et al. 1986), yet powerful enough to provide a reliable signal for fluorescence analysis.  
 
The  interpretation  of  fluorescence  signals  has  developed  considerably  since  the  early  experiments  of 
Kautsky  and  Hirsch  (1931)  with  several  techniques  employed  to  determine  information  about  the 
photosynthetic performance of PSII (Baker 1991).  The CFM-1 hardware and software has been designed 
to incorporate these techniques into simple routines which store appropriate fluorescence measurements 
and automatically calculate key parameters.  
 
Common Fluorescence Measurements 
 
There are a vast number of different measurement protocols and parameter nomenclatures.  This section 
will cover the instrumentation requirements of the two most common fluorescence analysis procedures. 
The  most  widely  accepted  parameter  definitions  used  by  “main-stream”  workers  are  presented  in  a 
glossary with alternative nomenclatures. 
 
There are two common types of fluorescence measurement: 
 
1. Fluorescence Induction Analysis (Kautsky Curve). 
 
If a sample is dark adapted the PSII electron acceptor pool is gradually re-oxidised to a 
point where all of the PSII reaction centres are capable of under-taking photochemistry. 
Illumination  induces  a  fast  (approx.  1  s)  polyphasic  rise  in  fluorescence  which  is 
followed  by  a  slow  (approx.  2  min)  fluorescence  decline  to  a  steady  state  level  of 
fluorescence. This induction phenomena is often referred to as the Kautsky Curve. 
 
 
The  different  phases  of  the  Kautsky Curve relate to different limiting reactions which 
occur  as  photosynthetic  reactions  are  initiated;  originally  they  were  denoted  with  the 
letters O,I,D,P,S,M,T. With the development of shutter-less high-speed data sampling 
instruments  such  as  the  Hansatech  Plant  Efficiency Analyser a  further  (J)  peak  was 
discovered in the fast fluorescence rise. This is best observed on a logarithmic plot.