CIRAS-3 Operation Manual V. 1.09  72  support@ppsystems.com 
 
practical – this way you will have both hands free and avoid unnecessary changes to natural leaf 
orientation, and you can position all leaves in a uniform orientation to the sun when the LED light unit is 
not in use.   
With the leaf enclosed in the cuvette you should quickly notice a series of dynamic leaf responses, 
assuming ideal physiological conditions.  Sub-stomatal CO
2
 concentration (Ci) will begin to fall, after 
being initially equal to or higher than the reference CO
2 
concentration (CO2r).  When Ci<CO2r there is an 
instantaneous change in calculated net photosynthesis (A), from a negative rate (respiration) to a positive 
rate.  Simultaneously, the differential CO
2
 concentration (CO2d) will go into negative values while 
differential humidity (H2Od) becomes positive – the leaf is both fixing carbon dioxide and transpiring 
water vapor.   Be aware of the leaf’s light history and consider how that affects the chamber acclimation 
phase – a highly-shade tolerant plant or shade leaf will require different acclimation in the leaf chamber 
than a shade-intolerant or sun leaf.  Consider also seasonal affects and leaf ontogeny – reduced rates of 
metabolism can often be expected despite year-round plant culture in artificial (indoor) environments. 
Note that some physiological variables, especially A, gs (stomatal conductance) and CO2d will continue 
changing as the leaf acclimates and approaches a stable state.  This can require several seconds and as 
long as several minutes.  This depends largely on the preconditioned state of the plant relative to the 
environmental conditions inside the cuvette.  A useful illustration of this can be seen with a highly shade-
adapted plant that is suddenly exposed to strong light intensities in the leaf chamber.  In this case, 
delayed gas exchange responses can be expected compared to a plant (or leaf) accustomed to more 
intense light conditions.  If your goal is to collect a large quantity of relatively short duration 
measurements from a large sample group of plants/leaves, especially when allowing ambient light and/or 
temperature conditions to prevail, you will probably use the Manual Recording option.  This allows you 
maximum flexibility as to when to capture a reading and when to wait. 
Additional Filtering in Dirty/Dusty Environments 
If working in extreme dirty/dusty environments, we strongly recommend 
using the external air in filter (included in your CIRAS-3 spares kit).  It 
easily connects to the CIRAS-3 “AIR IN” port as shown here.