5 Automatic Runs
136 July 29, 2013, 715003794 Rev. B
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Controlled by Empower software
If your HPLC system is controlled by Empower software, you perform an
automatic run using a project, instrument method, configured system, method
set, and sample set stored in software. For details on performing runs using
Empower software, see the procedures in “Perform automatic runs under
Empower software control” on page 142.
Controlled by MassLynx software
If your HPLC system is controlled by MassLynx software, you must select an
LC method that defines the separations module’s operating parameters and
those of the system’s detector (but not the mass spectrometer, if included). For
details on performing a run using MassLynx software, see “Perform automatic
runs under MassLynx control” on page 144.
Perform automatic runs in a standalone mode
The following figure shows the steps for setting up and performing an
automatic run in a standalone configuration (System Controller or No
Interaction mode).