Software troubleshooting ...................................................... 181
Service tools ................................................................. 183
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APPENDIX B Link the instrument to your Connect cloud-
based platform account—detailed instructions ...................... 184
Workflow: Set up the instrument for Connect cloud-based platform access ........... 184
Network requirements ........................................................ 184
Link the instrument from a mobile device ........................................ 185
Create a Connect cloud-based platform PIN and generate the QR code on
the instrument ........................................................... 185
Register the instrument with the Instrument Connect App ..................... 186
Link the instrument using a link code ............................................ 186
Set up email notifications from the instrument .................................... 190
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APPENDIX C Dye calibration and install standard checks ......... 192
Calibrate dyes ................................................................ 192
Overview of system dye set and custom dye set calibration .................... 192
System versus custom dyes ................................................ 192
Factory, auto, and manual calibration ....................................... 193
Determine if manual calibration is required .................................. 193
Perform a system dye calibration .......................................... 195
Perform a custom dye calibration ........................................... 197
View the dye calibration history ............................................ 201
Import or export a custom dye set .......................................... 202
Perform an install run ......................................................... 203
Overview of install checks ................................................. 203
Perform an install run ..................................................... 204
View install run results .................................................... 205
Export the install run report ............................................... 208
View the install run history ................................................. 210
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APPENDIX D Create and run an HID plate .......................... 212
HID analysis requirements ..................................................... 212
Pull-up reduction feature ...................................................... 213
Resolution algorithm .......................................................... 214
Workflow: HID analysis ........................................................ 215
HID install run ................................................................ 215
HID run module, dye sets, size standard definitions, and kits ....................... 216
Manage kits (HID applications only) ............................................. 217
Contents
SeqStudio
™
Genetic Analyzer Instrument and Software User Guide
9