Applied Biosystems 3500 User Manual

sizing 100
review results, sequencing
access 82
base colors
37
export defaults 37
metric analysis 84
modify data in secondary analysis software 90,
102
QV colors and ranges 37
thumbnails 87
trace defaults 37
trace quality reports 89
RFID
dened 16
error message 258, 298
overview 295
required position for label 232
troubleshoot 258, 298
run
See also instrument run
abort 72
pause and resume 72
terminate 72
troubleshooting 264
See also instrument run
run log, number of runs to preserve 37
run module 163
run modules
fragment/HID analysis 281
sequencing analysis 281
run name
default 59
enter 59
run voltage 163
S
SAE module, security 191
See also audit
safety, biohazard 309
safety labels 303
sample data le storage
le name convention location 50
injection folder 155
instrument run name folder 155
results group location 50
results group name folder 155
sample data le storage location 27
sample data les, archive 244
sample info, enter 47
sample name
assign 75
ll and ll series 75
sample plate. See plate
sample quality
See also review results, fragment
in monitor run 67
in review results 94
See also review results, fragment
sample type
plate view 47
table view 75
sample view 81
samples, review previously run 84, 94
scale plots 97
scheduled maintenance
notications 223
tasks 223
scientist user role 197
security
export seings 217
import seings 218
security policies 193
security, administrators
account setup 193
enable or disable 192
export seings 217
export user account seings 217
import seings 218
import user account seings 218
notication 193, 194
overview 191
security policies 193
spaces in user names 194
user accounts 195
user report 200
user role 197
username restrictions 193
security, users
account suspension 220
log in 219
overview 218
password change 219
permissions 219
session timeout 220
sequence quality
See also review results, sequencing
in monitor run 67
in review results 84
mixed base seings 88
pure base seings 88
recommended ranges 88
trace quality reports 89
See also review results, sequencing
sequencing analysis
reagents, part numbers and storage conditions
290
dye sets 284
Index
322
3500/3500xL Genetic Analyzer User Guide—Data Collection Software v3.1

Applied Biosystems 3500 Specifications

General

Number of capillaries	8
Capillary Length	50 cm
Laser	Solid-state laser
Instrument Type	Capillary electrophoresis system
Technology	Capillary Electrophoresis (CE)
Weight	95 kg
Power Requirements	100–240 V