Thermo Scientific appliedbiosystems SeqStudio Flex Series - Page 109

Secondary analysis cloud applications on Thermo Fisher
™
Connect
The secondary analysis cloud applications listed below are available for cloud analysis.
Visit apps.thermofisher.com for the latest available secondary analysis applications.
Secondary analysis applications on Thermo Fisher
™
Connect
Analysis App Description
Sequencing Quality Check (QC) module
•
Automatically checks sequence trace quality.
•
Provides a results summary that is based on quality
parameter settings.
•
Auto-flags lower-quality traces for further inspection.
Variant Analysis (VA) module
•
Finds variants in samples that are sequenced on Applied
Biosystems
™
genetic analyzers.
•
Reports variants at genomic coordinates.
•
Allows export of variant calls in standard Variant Call
Format.
Next‑generation Confirmation
(NGC) module
•
Confirms next-generation sequencing (NGS) variants
using capillary electrophoresis (CE) technology.
•
Allows visualization of the variants that are detected by
both NGS and CE platforms.
•
Allows export of confirmed variants in standard Variant
Call Format.
Fragment analysis Peak Scanner
™
Software Performs peak sizing.
Microsatellite Analysis
Software
Performs peak sizing and genotyping on microsatellite
samples.
Chapter 5 Create a plate file in the Plate Manager software
Get started with the Plate Manager software (cloud)
5
SeqStudio
™
Flex Series Genetic Analyzer with Instrument Software v1.0 User Guide
109