Thermo Scientific appliedbiosystems SeqStudio Flex Series - Page 9

Run modules library ........................................................... 272
Run module overview ..................................................... 272
Run module provided ..................................................... 272
Create a new run module ................................................. 272
Run module settings ...................................................... 273
Size standards library ......................................................... 275
Size standard overview .................................................... 275
Size standard definition files provided ....................................... 275
Create a new size standard ................................................ 276
Modify a factory-provided normalization size standard ........................ 277
Size standard normalization feature ......................................... 278
File Name Conventions library ................................................. 278
File name convention overview ............................................. 278
Create a new file name convention .......................................... 279
File name convention settings .............................................. 282
Injection protocols library ...................................................... 283
Injection protocol overview ................................................ 283
Create a new injection protocol ............................................ 283
Injection protocol settings ................................................. 284
Dye sets library .............................................................. 285
Dye set overview ......................................................... 285
Create a new dye set ...................................................... 285
Create a custom dye set ................................................... 286
Dye set settings .......................................................... 286
Analysis settings library ....................................................... 288
Analysis settings overview ................................................. 288
Create a new analysis settings ............................................ 289
Analysis settings—Sequencing ............................................. 291
Analysis settings—Fragment analysis ....................................... 295
Results Groups library ........................................................ 301
Results group overview .................................................... 301
Create a new results group ................................................ 302
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CHAPTER 12 Run calibrations and install checks ............................ 304
Run a spatial calibration ....................................................... 304
Spatial calibration overview ................................................ 304
When to perform a spatial calibration ........................................ 304
Perform a spatial calibration ............................................... 305
Evaluate the spatial calibration results ....................................... 306
Contents
SeqStudio
™
Flex Series Genetic Analyzer with Instrument Software v1.0 User Guide
9